RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g41590.1 View Network Show in Genome Browser |
| Other Names | Os10g0565600 |
| Description | zinc finger, C3HC4 type domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 22388699-22395878 Nucleotide Length: 2535 |
| Protein-coding | LOC_Os10g41590 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g32450 LOC_Os05g48620 LOC_Os03g10190 LOC_Os07g07240 LOC_Os03g57790 LOC_Os03g22570 LOC_Os05g08960 LOC_Os08g38300 LOC_Os01g62230 LOC_Os01g05610 LOC_Os01g05630 More.. |
| Downstream Genes | LOC_Os12g37430 LOC_Os11g34300 LOC_Os11g07500 LOC_Os12g35030 LOC_Os12g44390 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g41590.1 |
| Rice Genome Annotation | LOC_Os10g41590.1 |
| Ricechip | LOC_Os10g41590.1 |
| KEGG | osa:4349420 dosa:Os10t0565600-01 |
| Entrez-Gene | 4349420 |