RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g03400.1 View Network Show in Genome Browser |
| Other Names | Os11g0127900 |
| Description | ribosomal protein, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 1285392-1286291 Nucleotide Length: 450 |
| Protein-coding | LOC_Os11g03400 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g18570 LOC_Os05g27940 LOC_Os07g01870 LOC_Os03g18580 LOC_Os03g54890 LOC_Os03g31090 LOC_Os02g18380 LOC_Os09g08430 LOC_Os05g38520 LOC_Os04g42380 LOC_Os03g04750 More.. |
| Downstream Genes | LOC_Os12g38000 LOC_Os11g38959 LOC_Os11g29190 LOC_Os12g03880 LOC_Os11g04070 LOC_Os11g05562 LOC_Os11g24610 LOC_Os11g41610 LOC_Os11g11390 LOC_Os12g21798 LOC_Os12g07010 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g03400.1 |
| Rice Genome Annotation | LOC_Os11g03400.1 |
| Ricechip | LOC_Os11g03400.1 |
| KEGG | osa:4349653 dosa:Os11t0127900-01 |
| Entrez-Gene | 4349653 |