RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g38959.1 View Network Show in Genome Browser |
| Other Names | Os11g0602600 |
| Description | 40S ribosomal protein S9-2, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 23176604-23178856 Nucleotide Length: 588 |
| Protein-coding | LOC_Os11g38959 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g02510 LOC_Os03g37970 LOC_Os03g04750 LOC_Os10g32820 LOC_Os04g42380 LOC_Os02g56960 LOC_Os07g42950 LOC_Os02g14059 LOC_Os05g11710 LOC_Os01g10820 LOC_Os03g04590 More.. |
| Downstream Genes | LOC_Os12g03090 LOC_Os12g05430 LOC_Os12g38000 LOC_Os12g07010 LOC_Os11g41610 LOC_Os12g03880 LOC_Os12g32380 LOC_Os12g42180 LOC_Os12g07300 LOC_Os12g04010 LOC_Os12g34510 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g38959.1 |
| Rice Genome Annotation | LOC_Os11g38959.1 |
| Ricechip | LOC_Os11g38959.1 |
| KEGG | osa:4350869 dosa:Os11t0602600-01 |
| Entrez-Gene | 4350869 |