RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os12g07050.2 View Network Show in Genome Browser |
| Other Names | Os12g0168200 |
| Description | RNA polymerase II subunit A C-terminal domain phosphatase ssu72, putative, expressed |
| Gene Attributes | Chromosome: Chr12 CDS Coordinates (5'-3'): 3450066-3454059 Nucleotide Length: 504 |
| Protein-coding | LOC_Os12g07050 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g46570 LOC_Os01g72220 LOC_Os09g39590 LOC_Os10g29560 LOC_Os06g21470 LOC_Os04g18010 LOC_Os03g63590 LOC_Os03g16110 LOC_Os09g36440 LOC_Os05g13300 LOC_Os05g32600 More.. |
| Downstream Genes | LOC_Os12g37370 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2926 |
| Database Links | |
|---|---|
| Gramene | LOC_Os12g07050.2 |
| Rice Genome Annotation | LOC_Os12g07050.2 |
| Ricechip | LOC_Os12g07050.2 |
| KEGG | osa:4351607 dosa:Os12t0168200-01 |
| Entrez-Gene | 4351607 |