RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Protein ID | LOC_Os05g23950 View Network |
| Names | Os05g0305200 protein (cDNA, clone: J065161N15, full insert sequence) |
| Function | TRAF-type zinc finger family protein, expressed |
| Attributes | Length: 335 Status: Complete Existence: Evidence at transcript level Molecular Weight: 38290.8 pI: 5.4616 Subcellular Location (predicted): Nucleus |
| Gene Model | LOC_Os05g23950.1 |
| Enzyme | 2.5.1.- Transferases transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date) 2.5.1.10 (2E,6E)-farnesyl diphosphate synthase 2.5.1.1 dimethylallyltranstransferase |
| Reactions | |
|---|---|
| OSR1140 OSR0933 OSR1074 OSR0685 OSR0829 OSR1080 OSR0831 | |
| Pathways | |
|---|---|
| KEGG Pathway | rn00900 rn01100 rn01110 |
| Metacyc Pathway | PWY-5132 PWY-5133 PWY-5365 PWY-5123 POLYISOPRENSYN-PWY PWY-5121 PWY-5122 |
| Database Links | |
|---|---|
| UniprotKB | B7F8T0 |
| Ensembl | LOC_Os05g23950.1 |
| Refseq | NP_001174335.1 |
| EMBL | AK241429 AP008211 CM000142 |
| KEGG | osa:9271601 dosa:Os05t0305200-01 |