RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Protein ID | LOC_Os05g34180 View Network |
| Names | Os05g0413400 protein (Putative isopentenyl-diphosphate delta-isomerase) (cDNA clone:001-008-C05, full insert sequence) (cDNA clone:J013124F09, full insert sequence) |
| Function | hydrolase, NUDIX family, domain containing protein, expressed |
| Attributes | Length: 294 Status: Complete Existence: Evidence at transcript level Molecular Weight: 32588.2 pI: 5.6395 Subcellular Location (adjusted): Mitochondria Chloroplast |
| Gene Model | LOC_Os05g34180.1 |
| Enzyme | 5.3.3.2 isopentenyl-diphosphate Delta-isomerase |
| Reactions | |
|---|---|
| OSR0320 | |
| Protein-Protein Interaction ( Show in Viewer ) |
|---|
| LOC_Os11g32280 LOC_Os01g72340 |
| Pathways | |
|---|---|
| KEGG Pathway | rn00900 rn01100 rn01110 |
| Metacyc Pathway | PWY-922 NONMEVIPP-PWY POLYISOPRENSYN-PWY |
| Database Links | |
|---|---|
| UniprotKB | Q6AUB0 |
| Ensembl | LOC_Os05g34180.1 |
| Refseq | NP_001055547.1 |
| EMBL | AC130607 AP008211 AK060336 AK099027 CM000142 |
| KEGG | osa:4338791 dosa:Os05t0413400-01 |