RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Protein ID | LOC_Os05g46580 View Network |
| Names | Os05g0543400 protein (Putative farnesyl pyrophosphate synthase) (cDNA clone:J023072A14, full insert sequence) (cDNA clone:J033069I20, full insert sequence) |
| Function | polyprenyl synthetase, putative, expressed |
| Attributes | Length: 356 Status: Complete Existence: Evidence at transcript level Molecular Weight: 40634.5 pI: 5.5051 Subcellular Location (adjusted): Cytosol |
| Gene Model | LOC_Os05g46580.1 |
| Enzyme | 2.5.1.10 (2E,6E)-farnesyl diphosphate synthase |
| Reactions | |
|---|---|
| OSR1080 | |
| Protein-Protein Interaction ( Show in Viewer ) |
|---|
| LOC_Os06g02144 LOC_Os09g33980 LOC_Os06g43210 LOC_Os11g29400 LOC_Os05g46580 LOC_Os10g35550 LOC_Os01g50760 LOC_Os05g41900 LOC_Os02g02570 LOC_Os05g46580 LOC_Os01g16190 LOC_Os01g01312 |
| Pathways | |
|---|---|
| KEGG Pathway | rn00900 rn01100 rn01110 |
| Metacyc Pathway | PWY-5123 POLYISOPRENSYN-PWY PWY-5121 |
| Database Links | |
|---|---|
| UniprotKB | Q65XM9 |
| Ensembl | LOC_Os05g46580.1 |
| Refseq | NP_001056204.1 |
| EMBL | AC098833 AP008211 AK073822 AK100273 CM000142 |
| KEGG | osa:4339489 dosa:Os05t0543400-01 |