RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Protein ID | LOC_Os08g42730 View Network |
| Names | Os08g0540100 protein (Putative biotin synthase) (cDNA clone:J033031K02, full insert sequence) |
| Function | radical SAM enzyme, putative, expressed |
| Attributes | Length: 382 Status: Complete Existence: Evidence at transcript level Molecular Weight: 41627.8 pI: 7.3745 Subcellular Location (predicted): Mitochondria |
| Gene Model | LOC_Os08g42730.1 |
| Enzyme | 2.8.1.6 biotin synthase |
| Reactions | |
|---|---|
| OSR0492 OSR1491 OSR0475 | |
| Protein-Protein Interaction ( Show in Viewer ) |
|---|
| LOC_Os11g01450 LOC_Os12g04240 LOC_Os08g42730 LOC_Os04g11880 LOC_Os03g02260 LOC_Os08g42730 LOC_Os04g47240 LOC_Os02g35060 LOC_Os01g10290 LOC_Os06g21340 LOC_Os01g21820 LOC_Os01g27630 LOC_Os02g53420 LOC_Os05g43576 |
| Pathways | |
|---|---|
| KEGG Pathway | rn00780 rn01100 |
| Metacyc Pathway | PWY-3701 BIOTIN-SYNTHESIS-PWY |
| Database Links | |
|---|---|
| UniprotKB | Q69U93 |
| Ensembl | LOC_Os08g42730.1 |
| Refseq | NP_001062381.1 |
| EMBL | AP004592 AP008214 AK101236 CM000145 |
| KEGG | osa:4346185 dosa:Os08t0540100-01 |