RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Protein ID | LOC_Os01g70380 View Network |
| Names | Long chain base biosynthesis protein 2d |
| Function | Serine palmitoyltransferase (SPT). The heterodimer formed with LCB1 constitutes the catalytic core (By similarity). |
| Attributes | Length: 490 Status: Complete Existence: Evidence at transcript level Molecular Weight: 53700.2 pI: 9.031 Subcellular Location (predicted): Extracellular Mitochondria |
| Gene Model | LOC_Os01g70380.1 |
| Enzyme | 2.1.2.1 glycine hydroxymethyltransferase 2.3.1.50 serine C-palmitoyltransferase 2.3.1.47 8-amino-7-oxononanoate synthase |
| Reactions | |
|---|---|
| OSR2260 OSR2548 OSR2236 | |
| Pathways | |
|---|---|
| KEGG Pathway | rn00260 rn00460 rn00630 rn00670 rn00680 rn01100 rn01120 rn00600 rn00780 |
| Metacyc Pathway | GLYSYN-PWY 1CMET2-PWY PWY-181 PWY-3841 PWY-3661 PWY-2161 PWY-2201 SPHINGOLIPID-SYN-PWY PWY-3701 BIOTIN-SYNTHESIS-PWY |
| Database Links | |
|---|---|
| UniprotKB | Q5JK39 |
| Ensembl | LOC_Os01g70380.1 |
| Refseq | NP_001045279.1 |
| EMBL | AP004330 AP008207 CM000138 AK120617 |
| KEGG | osa:4326966 dosa:Os01t0928800-01 |