SoyOD

SoyOD

—Soybean Omics Database

An integrated omics database for soybean germplasm and molecular breeding

E.g. SHX852B , Zhong_Huang_13_T2T , Glyma.12G070400 , Plant height , Chr18:1000000-2000000

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Genome

Assembly genome Gene browser Gene search Transcription factor Transposable element Homologous gene

Transcriptome

Tissue expression Seed development subregions Tissue expression in germplasm Seed development in germplasm Abiotic stress Biotic stress Nutrient absorption Co-expression

Phenome

Germplasm search Germplasm distribution Plant morphology Biochemistry Plant growth Yield related Abiotic stress Biotic stress

Population

Population info Population structure Selective sweep

Variome

SNP search InDel search GWAS

Synteny

SynVisio Genome synteny

Toolkits

Jbrowse BLAST Soy-Version converter Seq extraction Heatmap Diversity Haplotype

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Genome Transcriptome TF/TE GO/KEGG Population Variation Phenome

About

Tissue expression Tissue expression in other genome

SoyeFP

E.g. Glyma_01G001600

Minimum Value: Maximum Value:

Gene Table

Bar Chart

Heatmap

Line Chart

SoyeFP

E.g. Glyma_01G001600

Minimum Value: Maximum Value:

genetable

barChart

heatmap

lineChart

Funded by the NSFC. Developed by the College of Life Sciences, Zhejiang University.
Huixia Shou Lab. and Ming Chen Lab. All Rights Reserved.