RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Protein ID | LOC_Os03g50090 View Network |
| Names | DEAD-box ATP-dependent RNA helicase 21 |
| Function | ATP-dependent RNA helicase involved in mRNA splicing. May destabilize the U1/5'-splice site duplex to permit an effective competition for the 5'-splice site by the U6 snRNA, resulting in the switch between U1 and U6 at the 5'-splice site. May also act to unwind the U4/U6 base-pairing interaction in the U4/U6/U5 snRNP, facilitating the first covalent step of splicing (By similarity). |
| Attributes | Length: 737 Status: Complete Existence: Evidence at transcript level Molecular Weight: 84521 pI: 9.2802 Subcellular Location (adjusted): Cytosol |
| Gene Model | LOC_Os03g50090.1 LOC_Os03g50090.2 LOC_Os03g50090.3 LOC_Os03g50090.4 |
| Enzyme | 3.6.3.1 phospholipid-translocating ATPase 3.6.1.3 adenosinetriphosphatase 3.6.4.- Hydrolases acting on acid anhydrides to facilitate cellular and subcellular movement 3.6.1.5 apyrase |
| Reactions | |
|---|---|
| OSR0792 | |
| Pathways | |
|---|---|
| KEGG Pathway | rn00230 rn00680 |
| Database Links | |
|---|---|
| UniprotKB | Q53RK8 |
| Ensembl | LOC_Os03g50090.1 LOC_Os03g50090.2 LOC_Os03g50090.3 LOC_Os03g50090.4 |
| Refseq | NP_001051038.1 |
| EMBL | AC087181 DP000009 AP008209 CM000140 |
| KEGG | osa:4333866 dosa:Os03t0708600-01 |